———————————– 2023 ———————————–

Galiñanes G, Huber D, 2023. Continuous estimation of reaching space in superficial layers of the motor cortex. bioRxiv

Lee KS, Loutit A, De Thomas Wagner D, Sanders M, Prsa M, Huber D, 2023. Transformation of neural coding for vibrotactile stimuli along the ascending somatosensory pathway. bioRxiv

Lee KS, De Thomas Wagner D, Sanders M, Huber D, 2023. Emergence of a somatosensory tonotopic map for substrate vibration in the brainstem. bioRxiv

Luongo FJ, Liu L, Ho CLA, Hesse JK, Wekselblatt JB, Lanfranchi FF, Huber D, Tsao DY, 2023. Mice and primates use distinct strategies for visual segmentation. eLife 12:e74394

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Barkus C, Bergmann C, Branco T, Carandini M, Chadderton PT, Galiñanes GL, Gilmour G, Huber D, Huxter JR, Khan AG, King AJ, Maravall M, O’Mahony T, Ragan CI, Robinson ESJ, Schaefer AT, Schultz SR, Sengpiel F, Prescott MJ.Refinements to rodent head fixation and fluid/food control for neuroscience. J Neurosci Methods. 2022 Nov 1;381:109705.

Ho A, Fichtel C, Huber D, 2021. The gray mouse lemur (Microcebus murinus) as a model for early primate brain evolution. Current Opinion in Neurobiology
Volume 71, 92-99

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Temporal controls over inter-areal cortical projection neuron fate diversity.
Klingler E, Tomasello U, Prados J, Kebschull JM, Contestabile A, Galiñanes GL, Fièvre S, Santinha A, Platt R, Huber D, Dayer A, Bellone C, Jabaudon D, 2021. Temporal controls over inter-areal cortical projection neuron fate diversity. Nature. 2021 Nov;599(7885):453-457.

Prsa M, Kiliçel D, Nourizonoz A, Lee KS, Huber D, 2021, A common computational principle for vibrotactile pitch perception in mouse and human. Nature Communications, 12, 5336

Kathe C, Michoud F, Schönle P, Rowald A, Brun N, Ravier J, Furfaro I, Paggi V, Kim K, Soloukey S, Asboth L, Hutson TH, Jelescu I, Philippides A, Alwahab N, Gandar J, Huber D, De Zeeuw CI, Barraud Q, Huang Q, Lacour SP, Courtine G, 2021, Wireless closed-loop optogenetics across the entire dorsoventral spinal cord in mice. Nature biotechnology, September 27th, 2021, DOI: 10.1038/s41587-021-01019-x

Ho CLA, Zimmermann R, Florez Weidinger JD, Prsa M,Schottdorf M,
Merlin S, Okamoto T, Ikezoe K, Pifferi F, Aujard F, Angelucci A, Wolf F & Huber D, 2020. Orientation Preference Maps in Microcebus murinus Reveal Size-Invariant Design Principles in Primate Visual Cortex. Current Biology

———————————– 2020 ———————————–

Prsa M, Kiliçel D, Nourizonoz A, Lee KS, Huber D, 2020. Common computational principle for vibro-tactile pitch perception in mouse and human. bioRxiv.

Nourizonoz A, Zimmermann R, Ho CLA, Pellat S, Ormen Y, Prévost-Solié C, Reymond G, Pifferi F, Aujard F, Herrel A & Huber D, 2020. EthoLoop: automated closed-loop neuroethology in naturalistic environments. Nature Methods

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Prsa M, Morandell K, Cuenu G, Huber D, 2019. Feature-selective encoding of substrate vibrations in the forelimb somatosensory cortex. Nature 567, 384–388

———————————– 2018 ———————————–

Galiñanes G, Huber D, 2018. Circuits for Raiders. Neuron 99, 872-783.

Galiñanes G, Marchand JP, Turcotte R, Pellat S, Ji N, Huber D. 2018 Optical alignment device for two-photon microscopy, Biomedical Optics Express, 9 (8), 3624-3639

Galiñanes G, Bonardi C, Huber D. 2018. Directional Reaching for Water as a Cortex-Dependent Behavioral Framework for Mice. Cell Reports 22, 2767–2783

Prsa M, Huber D. 2018. Frequency selective encoding of substrate vibrations in the somatosensory cortex. bioRxiv

Yüzgeç O, Prsa M, Zimmermann R, Huber D. 2018. Pupil Size Coupling to Cortical States Protects the Stability of Deep Sleep via Parasympathetic Modulation. Current Biology 28, 392–400

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Morandell K, Huber D, 2017. The role of forelimb motor cortex areas in goal directed action in mice. Scientific Reports 7, 15759

Prsa M, Galiñanes GL, Huber D. 2017 Rapid Integration of Artificial Sensory Feedback during Operant Conditioning of Motor Cortex Neurons. Neuron 93, 929–939

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Andrásfalvy BK*, Galiñanes GL*, Huber D, Barbic M, Macklin JJ, Susumu, K, Delhandty JB, Huston AL, Makara JK, Menditz IL, 2014. Quantum dot-based multiphoton fluorescent pipettes for targeted neuronal electrophysiology. Nature Methods 11, 1237–1241 (2014)

Guo ZV, Hires SA, Li N, O’Connor DH, Komiyama T, Ophir E, Huber D, Bonardi C, Morandell K, Gutnisky DA, Peron S, Xu NL, Cox J, Svoboda K, 2014. Procedures for Behavioral Experiments in Head-Fixed Mice. PLoS ONE 9(2): e88678

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Guo ZV, Li N, Huber D, Ophir E, Gutnisky DA, Ting JT, Feng G & Svoboda K. 2013 Flow of Cortical Activity Underlying a Tactile Decision in Mice. Neuron 81(1), 179-194

O’Connor DH, Hires SA, Guo ZV, Li N, Yu J, Sun QQ, Huber D & Svoboda K, 2013. Neural coding during active somatosensation revealed using illusory touch. Nature Neuroscience Moore JD, Deschênes M, Furuta T, Huber D, Smear MC, Demers M, Kleinfeld D. 2013. Hierarchy of orofacial rhythms revealed through whisking and breathing. Nature 97: 205–210.

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Xu NL, Harnett MT, Williams SR, Huber D, O’Connor DH, Svoboda K, Magee JC, 2012. Nonlinear dendritic integration of sensory and motor input during an active sensing task. Nature. 492:247-51

Petreanu L, Gutnisky DA, Huber D, Xu NL, O’Connor DH, Tian L, Looger L, Svoboda K. 2012. Activity in motor-sensory projections reveals distributed coding in somatosensation. Nature. 489:299-303

Clack NG, O’Connor DH, Huber D, Petreanu L, Hires A, Peron S, Svoboda K, Myers EW, 2012. Automated tracking of whiskers in videos of head fixed rodents. PLoS Computational Biology Jul;8(7):e1002591

Huber D, Gutnisky DA, Peron S, O’Connor DH, Wiegert JS, Tian L, Oertner TG, Looger LL, Svoboda K. 2012. Multiple dynamic representations in the motor cortex during sensorimotor learning. Nature 484: 473–478

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Mao T, Kusefoglu D, Hooks BM, Huber D, Petreanu L, Svoboda K. 2011. Long-range neuronal circuits underlying the interaction between sensory and motor cortex. Neuron. 72: 111-23. Hooks BM, Hires SA, Zhang Y-X, Huber D, Petreanu L, Svoboda K, Shepherd GMG. 2011. Laminar analysis of excitatory local circuits in vibrissal motor and sensory cortical areas. PLoS biology 9:e1000572.

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O’Connor DH, Clack NG, Huber D, Komiyama T, Myers EW, Svoboda K. 2010. Vibrissa-based object localization in head-fixed mice. The Journal of neuroscience 30:1947-67.

Komiyama T, Sato TR, O’Connor DH, Zhang Y-X, Huber D, Hooks BM, Gabitto M, Svoboda K. 2010. Learning-related fine-scale specificity imaged in motor cortex circuits of behaving mice. Nature 464:1182-6.

O’Connor DH, Peron SP, Huber D, Svoboda K. 2010. Neural activity in barrel cortex underlying vibrissa-based object localization in mice. Neuron 67:1048-61.

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O’Connor DH, Huber D, Svoboda K. 2009. Reverse engineering the mouse brain. Nature 461:923-9.

Tian L, Hires SA, Mao T, Huber D, Chiappe ME, Chalasani SH, Petreanu L, Akerboom J, McKinney SA, Schreiter ER, et al. 2009. Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators. Nature methods 6:875-81.

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Huber D, Petreanu L, Ghitani N, Ranade S, Hromádka T, Mainen Z, Svoboda K. 2008. Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice. Nature 451:61-4. Supplementary figures

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Petreanu L, Huber D, Sobczyk A, Svoboda K. 2007. Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections. Nature neuroscience 10:663-8.

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Huber D, Veinante P, Stoop R. 2005. Vasopressin and oxytocin excite distinct neuronal populations in the central amygdala. Science 308:245-8.

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Huber D, Keller M, Robert D. 2001. 3D light scanning macrography. Journal of microscopy 203:208-13.